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  5. PSME_00006837-RA

PSME_00006837-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006837-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi1g71680 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Brara.C03880.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
Brara.E01987.1 No alias arabinogalactan protein *(Xylogen) 0.04 Orthogroups_2024-Update
Glyma.01G234900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Glyma.11G008000 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
HORVU1Hr1G009490.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
LOC_Os01g59870 No alias LTPL65 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
LOC_Os07g07790 No alias LTPL75 - Protease inhibitor/seed storage/LTP family... 0.04 Orthogroups_2024-Update
LOC_Os07g07930 No alias LTPL78 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
MA_115537g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_1925g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_50191g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_71069g0010 No alias (at3g22600 : 86.7) Bifunctional inhibitor/lipid-transfer... 0.04 Orthogroups_2024-Update
PSME_00012810-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00013382-RA No alias (at4g14815 : 89.0) Bifunctional inhibitor/lipid-transfer... 0.04 Orthogroups_2024-Update
Potri.005G211900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Seita.2G050200.1 No alias arabinogalactan protein *(Xylogen) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 11 68
No external refs found!