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PSME_00006840-RA


Description : (at3g21360 : 251.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 502.0) & (original description: no original description)


Gene families : OG_42_0001175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006840-RA
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
MA_220550g0010 No alias (at3g21360 : 241.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
MA_498632g0010 No alias (at3g21360 : 250.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00006834-RA No alias (at3g21360 : 254.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00050620-RA No alias (at3g21360 : 240.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 47 323
No external refs found!