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  5. PSME_00006878-RA

PSME_00006878-RA


Description : (at3g62860 : 436.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G47630.1); Has 2895 Blast hits to 2893 proteins in 1018 species: Archae - 30; Bacteria - 1827; Metazoa - 110; Fungi - 120; Plants - 454; Viruses - 49; Other Eukaryotes - 305 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description)


Gene families : OG_42_0000201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006878-RA
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_18198 No alias caffeoylshikimate esterase 0.02 Orthogroups_2024-Update
Kfl00339_0040 kfl00339_0040_v1.1 (at3g62860 : 301.0) alpha/beta-Hydrolases superfamily... 0.01 Orthogroups_2024-Update
Pp1s42_257V6 No alias esterase lipase thioesterase family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 24 262
No external refs found!