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  5. PSME_00007051-RA

PSME_00007051-RA


Description : (at1g74930 : 102.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; ORA47; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 5510 Blast hits to 5399 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5503; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007051-RA
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_21979 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_23921 No alias ethylene-responsive transcription factor erf034 0.03 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_39586 No alias ethylene-responsive transcription factor erf106 0.03 Orthogroups_2024-Update
At1g71450 No alias Ethylene-responsive transcription factor ERF021... 0.03 Orthogroups_2024-Update
At4g16750 No alias Ethylene-responsive transcription factor ERF039... 0.04 Orthogroups_2024-Update
Bradi1g75040 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g38932 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Brara.B00253.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.C01595.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.G01019.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.G02253.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.02 Orthogroups_2024-Update
Brara.H02380.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.I01413.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.J02053.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G060876 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G076896 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.03 Orthogroups_2024-Update
Glyma.05G092800 No alias cooperatively regulated by ethylene and jasmonate 1 0.03 Orthogroups_2024-Update
Glyma.05G186700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G163900 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
HORVU0Hr1G016370.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G090250.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G077310.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g34260 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g34970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g22730 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g35240 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_436575g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_6447416g0010 No alias (at4g17500 : 134.0) Encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00011107-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G069300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G050700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G150800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G043400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G021900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s276_3V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.3G145700.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.8G237900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G212000.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.006G210300.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G077001.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G077200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G077300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G184400.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Solyc02g077370 No alias Ethylene Response Factor C.5 0.03 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.03 Orthogroups_2024-Update
Solyc11g042560 No alias Ethylene-responsive transcription factor ERF021 family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 16 65
No external refs found!