1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00007134-RA

PSME_00007134-RA


Description : (at4g36470 : 178.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9fyz9|bamt_antma : 136.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 356.0) & (original description: no original description)


Gene families : OG_42_0000061 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007134-RA
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
At5g38780 No alias Probable S-adenosylmethionine-dependent... 0.02 Orthogroups_2024-Update
At5g56300 No alias Gibberellic acid methyltransferase 2... 0.02 Orthogroups_2024-Update
Bradi1g43080 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
Bradi4g16110 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
Brara.K01376.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
GRMZM2G033126 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
Glyma.16G134732 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
LOC_Os06g13470 No alias SAM dependent carboxyl methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g20630 No alias SAM dependent carboxyl methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00048838-RA No alias (at4g36470 : 230.0) S-adenosyl-L-methionine-dependent... 0.04 Orthogroups_2024-Update
Potri.012G049900 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
Seita.2G116600.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sopen12g007390 No alias SAM dependent carboxyl methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR005299 MeTrfase_7 212 540
No external refs found!