PSME_00007153-RA

Description : (at4g36220 : 335.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o48923|c71da_soybn : 320.0) Cytochrome P450 71D10 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 670.0) & (original description: no original description)

Gene families : OG_42_0000031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00007153-RA
Cluster	HCCA clusters: Cluster_207

Target	Alias	Description	ECC score	Gene Family Method
115322	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
115634	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
116184	No alias	cytochrome P450, family 93, subfamily D, polypeptide 1	0.03	Orthogroups_2024-Update
116301	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
20611	No alias	Cytochrome P450 superfamily protein	0.03	Orthogroups_2024-Update
22372	No alias	Cytochrome P450 superfamily protein	0.03	Orthogroups_2024-Update
421431	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
421782	No alias	cytochrome P450, family 71, subfamily B, polypeptide 10	0.03	Orthogroups_2024-Update
A4A49_17712	No alias	cytochrome p450 71a4	0.03	Orthogroups_2024-Update
GRMZM2G085845	No alias	Cytochrome P450 superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G022100	No alias	Cytochrome P450 superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G181900	No alias	cytochrome P450, family 71, subfamily A, polypeptide 25	0.03	Orthogroups_2024-Update
Glyma.16G008600	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
HORVU5Hr1G061950.2	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.03	Orthogroups_2024-Update
MA_10430254g0010	No alias	(q9sbq9\|f3ph_pethy : 482.0) Flavonoid 3'-monooxygenase...	0.04	Orthogroups_2024-Update
MA_10433066g0010	No alias	"(at5g06900 : 236.0) member of CYP93D; ""cytochrome...	0.03	Orthogroups_2024-Update
MA_10433403g0010	No alias	(o48923\|c71da_soybn : 359.0) Cytochrome P450 71D10 (EC...	0.03	Orthogroups_2024-Update
MA_14663g0020	No alias	(at4g36220 : 335.0) encodes ferulate 5-hydroxylase...	0.03	Orthogroups_2024-Update
MA_158072g0010	No alias	(q9sbq9\|f3ph_pethy : 420.0) Flavonoid 3'-monooxygenase...	0.03	Orthogroups_2024-Update
MA_28222g0010	No alias	(q9sbq9\|f3ph_pethy : 533.0) Flavonoid 3'-monooxygenase...	0.04	Orthogroups_2024-Update
MA_59840g0010	No alias	(at5g07990 : 348.0) Required for flavonoid 3'...	0.03	Orthogroups_2024-Update
MA_9169998g0010	No alias	(at5g07990 : 367.0) Required for flavonoid 3'...	0.04	Orthogroups_2024-Update
PSME_00000931-RA	No alias	"(at3g48270 : 183.0) putative cytochrome P450;...	0.04	Orthogroups_2024-Update
PSME_00013671-RA	No alias	(o81970\|c71a9_soybn : 380.0) Cytochrome P450 71A9 (EC...	0.03	Orthogroups_2024-Update
PSME_00014587-RA	No alias	(at5g07990 : 380.0) Required for flavonoid 3'...	0.04	Orthogroups_2024-Update
PSME_00024895-RA	No alias	(at5g07990 : 380.0) Required for flavonoid 3'...	0.04	Orthogroups_2024-Update
PSME_00031273-RA	No alias	(at4g36220 : 401.0) encodes ferulate 5-hydroxylase...	0.03	Orthogroups_2024-Update
PSME_00034185-RA	No alias	"(at3g48280 : 346.0) putative cytochrome P450;...	0.04	Orthogroups_2024-Update
PSME_00045357-RA	No alias	(at5g07990 : 411.0) Required for flavonoid 3'...	0.03	Orthogroups_2024-Update
PSME_00046435-RA	No alias	(p37120\|c75a2_solme : 307.0) Flavonoid 3',5'-hydroxylase...	0.04	Orthogroups_2024-Update
PSME_00048472-RA	No alias	(o48923\|c71da_soybn : 333.0) Cytochrome P450 71D10 (EC...	0.04	Orthogroups_2024-Update
PSME_00054383-RA	No alias	(q9sbq9\|f3ph_pethy : 381.0) Flavonoid 3'-monooxygenase...	0.05	Orthogroups_2024-Update
Potri.018G051300	No alias	Cytochrome P450 superfamily protein	0.02	Orthogroups_2024-Update
Pp1s10_359V6	No alias	cytochrome p450	0.02	Orthogroups_2024-Update
Pp1s256_30V6	No alias	flavonoid 3-	0.02	Orthogroups_2024-Update
Seita.2G038600.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.02	Orthogroups_2024-Update
Seita.2G219600.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.03	Orthogroups_2024-Update
Seita.3G327400.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.02	Orthogroups_2024-Update
Seita.9G396900.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.02	Orthogroups_2024-Update
Seita.9G397000.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.02	Orthogroups_2024-Update
Sobic.001G364200.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.04	Orthogroups_2024-Update
Solyc03g122350	No alias	Cytochrome P450 (AHRD V3.3 *** Q0PNH1_CAPCH)	0.03	Orthogroups_2024-Update
Sopen03g031040	No alias	Cytochrome P450	0.02	Orthogroups_2024-Update
Sopen04g021480	No alias	Cytochrome P450	0.02	Orthogroups_2024-Update
Sopen04g025660	No alias	Cytochrome P450	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEA	InterProScan predictions
MF	GO:0020037	heme binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
MF	GO:0017048	Rho GTPase binding	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001128	Cyt_P450	46	509

External Links

No external refs found!

PSME_00007153-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation