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  5. PSME_00007251-RA

PSME_00007251-RA


Description : (p25011|ccnb1_soybn : 239.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at3g11520 : 233.0) Encodes a B-type mitotic cyclin.; CYCLIN B1;3 (CYCB1;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle, response to cyclopentenone, cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 4455 Blast hits to 4454 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 2045; Fungi - 567; Plants - 1152; Viruses - 37; Other Eukaryotes - 654 (source: NCBI BLink). & (reliability: 428.0) & (original description: no original description)


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007251-RA
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Brara.I00544.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
HORVU2Hr1G096070.9 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
PSME_00004806-RA No alias (at1g76310 : 314.0) core cell cycle genes; CYCLIN B2;4... 0.05 Orthogroups_2024-Update
PSME_00044357-RA No alias (at1g76310 : 301.0) core cell cycle genes; CYCLIN B2;4... 0.05 Orthogroups_2024-Update
Pp1s147_169V6 No alias n-terminal domain containing expressed 0.03 Orthogroups_2024-Update
Pp1s271_10V6 No alias ccb15_orysj ame: full=cyclin-b1-5 ame: full=g2... 0.03 Orthogroups_2024-Update
Sobic.009G181500.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Sopen12g030490 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen12g031500 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 414 528
IPR004367 Cyclin_C-dom 111 205
IPR006671 Cyclin_N 295 395
No external refs found!