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  5. PSME_00007319-RA

PSME_00007319-RA


Description : (at2g30550 : 238.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)


Gene families : OG_42_0000082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007319-RA
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_02601 No alias phospholipase a1-igamma2, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_06327 No alias phospholipase a1-igamma3, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_15963 No alias phospholipase a1-igamma1, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_16668 No alias phospholipase a1-igamma1, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_18741 No alias phospholipase a1-iigamma 0.05 Orthogroups_2024-Update
A4A49_42852 No alias phospholipase a1-ii 1 0.02 Orthogroups_2024-Update
At1g06250 No alias Phospholipase A1-IIalpha [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC2] 0.02 Orthogroups_2024-Update
Bradi2g45270 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g47970 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36540 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Brara.D02592.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Brara.J00468.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
GRMZM2G321290 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G036900 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G081400 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G251600 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G090670.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G072960.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
LOC_Os01g46250 No alias lipase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g41970 No alias lipase class 3 family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10398182g0010 No alias (at1g06800 : 375.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10426446g0010 No alias (at1g30370 : 270.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
MA_10426658g0020 No alias (at1g51440 : 196.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10430133g0010 No alias (at1g06800 : 469.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10431345g0010 No alias (at1g51440 : 266.0) Encodes a lipase that hydrolyzes... 0.07 Orthogroups_2024-Update
MA_10435579g0020 No alias (at4g18550 : 348.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
MA_10435754g0010 No alias (at1g30370 : 235.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
MA_162516g0010 No alias (at2g30550 : 246.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
MA_73124g0010 No alias (at1g51440 : 283.0) Encodes a lipase that hydrolyzes... 0.04 Orthogroups_2024-Update
MA_7986586g0010 No alias (at2g30550 : 246.0) Encodes a lipase that hydrolyzes... 0.04 Orthogroups_2024-Update
PSME_00027904-RA No alias (at1g06800 : 535.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
PSME_00050034-RA No alias (at4g16820 : 374.0) Encodes a lipase that hydrolyzes... 0.02 Orthogroups_2024-Update
PSME_00056842-RA No alias (at2g42690 : 407.0) alpha/beta-Hydrolases superfamily... 0.06 Orthogroups_2024-Update
Potri.001G263200 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G057900 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Potri.015G026500 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Seita.4G063900.1 No alias phospholipase-A1 *(PC-PLA1) 0.07 Orthogroups_2024-Update
Seita.5G132200.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.5G291500.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Seita.5G416000.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.6G065700.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Sobic.004G297600.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Sobic.005G111400.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Sobic.007G036900.1 No alias phospholipase-A1 *(PC-PLA1) 0.05 Orthogroups_2024-Update
Sobic.009G125300.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Sobic.010G047800.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Solyc11g065530 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g022050 No alias Lipase (class 3) 0.04 Orthogroups_2024-Update
Sopen02g022320 No alias Lipase (class 3) 0.04 Orthogroups_2024-Update
Sopen06g021020 No alias Lipase (class 3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 152 336
No external refs found!