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  5. PSME_00007328-RA

PSME_00007328-RA


Description : (original description: no original description)


Gene families : OG_42_0001384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007328-RA
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi3g26850 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.09G121000 No alias Function unknown 0.02 Orthogroups_2024-Update
PSME_00004635-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00004639-RA No alias (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00004642-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
Solyc11g005890 No alias Chitinase 1, putative (AHRD V3.3 *** B9RU38_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 75 242
No external refs found!