PSME_00007342-RA

Description : (q5z9s8|pdr12_orysa : 477.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (at1g59870 : 473.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidÃ±dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (reliability: 946.0) & (original description: no original description)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00007342-RA
Cluster	HCCA clusters: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
101338	No alias	pleiotropic drug resistance 11	0.03	Orthogroups_2024-Update
412710	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
417266	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
96758	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Bradi1g00460	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Cre16.g655450	No alias	pleiotropic drug resistance 3	0.03	Orthogroups_2024-Update
GRMZM5G892675	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.03G168101	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.07G015800	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.05	Orthogroups_2024-Update
Kfl00616_0050	kfl00616_0050_v1.1	(at1g59870 : 1348.0) ATP binding cassette transporter....	0.01	Orthogroups_2024-Update
LOC_Os01g24010	No alias	pleiotropic drug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00000869-RA	No alias	(q5z9s8\|pdr12_orysa : 1879.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00002220-RA	No alias	(q5z9s8\|pdr12_orysa : 1203.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00007105-RA	No alias	(q5z9s8\|pdr12_orysa : 1898.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00008988-RA	No alias	(q5z9s8\|pdr12_orysa : 1221.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00009473-RA	No alias	(at2g26910 : 1773.0) pleiotropic drug resistance 4...	0.06	Orthogroups_2024-Update
PSME_00011269-RA	No alias	(q7fmw4\|pdr15_orysa : 576.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00015395-RA	No alias	(q76cu2\|pdr1_tobac : 1904.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
Potri.015G006000	No alias	pleiotropic drug resistance 9	0.02	Orthogroups_2024-Update
Pp1s15_135V6	No alias	atp-binding cassette	0.06	Orthogroups_2024-Update
Pp1s15_137V6	No alias	atp-binding cassette	0.04	Orthogroups_2024-Update
Pp1s160_34V6	No alias	atp-binding cassette	0.04	Orthogroups_2024-Update
Pp1s170_10V6	No alias	atp-binding cassette	0.01	Orthogroups_2024-Update
Pp1s59_42V6	No alias	atp-binding cassette	0.03	Orthogroups_2024-Update
Seita.2G179600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Solyc12g100180	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen09g034570	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update
Sopen11g003170	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006094	gluconeogenesis	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019319	hexose biosynthetic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	46	198

External Links

No external refs found!

PSME_00007342-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation