Description : (at5g14420 : 142.0) RING domain ligase2 (RGLG2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)
Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00007424-RA | |
Cluster | HCCA clusters: Cluster_292 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g58190 | No alias | RING domain ligase2 | 0.02 | Orthogroups_2024-Update | |
Brara.B03874.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.03 | Orthogroups_2024-Update | |
Glyma.08G001466 | No alias | Copine (Calcium-dependent phospholipid-binding protein) family | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g40650 | No alias | copine-1, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00005024-RA | No alias | (at1g67800 : 322.0) Copine (Calcium-dependent... | 0.01 | Orthogroups_2024-Update | |
PSME_00021102-RA | No alias | (at3g01650 : 226.0) RING domain ligase1 (RGLG1);... | 0.04 | Orthogroups_2024-Update | |
Seita.5G421700.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.04 | Orthogroups_2024-Update | |
Sobic.007G220100.1 | No alias | E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010734 | Copine | 67 | 157 |
No external refs found! |