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  5. PSME_00007509-RA

PSME_00007509-RA


Description : (at1g58280 : 168.0) Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8). & (reliability: 314.0) & (original description: no original description)


Gene families : OG_42_0001413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001413_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007509-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Kfl00511_0050 kfl00511_0050_v1.1 (at1g58280 : 159.0) Phosphoglycerate mutase family... 0.01 Orthogroups_2024-Update
Sobic.006G002000.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g076830 No alias Phosphoglycerate mutase family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen04g030540 No alias Histidine phosphatase superfamily (branch 1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 65 139
No external refs found!