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  5. PSME_00007590-RA

PSME_00007590-RA


Description : (at2g38300 : 112.0) myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G40260.1); Has 1661 Blast hits to 1657 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 4; Plants - 1609; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007590-RA
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
438638 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
A4A49_31971 No alias myb family transcription factor phl11 0.03 Orthogroups_2024-Update
A4A49_41088 No alias myb family transcription factor phl5 0.03 Orthogroups_2024-Update
At2g01060 No alias Myb family transcription factor PHL7... 0.02 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
Bradi3g52320 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g29700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.E03448.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G051400 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.03G143600 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.07G153900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.08G116700 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.09G207300 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G045770.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G068100.2 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G107500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g23200 No alias KANADI1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g11330.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
PSME_00002495-RA No alias (at1g32240 : 135.0) Encodes a member of the KANADI... 0.06 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.05 Orthogroups_2024-Update
PSME_00043647-RA No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G060200 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G054800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s109_107V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.6G120200.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Seita.9G078300.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.02 Orthogroups_2024-Update
Solyc06g051060 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Solyc06g066340 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g067280 No alias MYB-CC type transfactor 0.03 Orthogroups_2024-Update
Sopen02g021600 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen04g003630 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g003060 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 71
No external refs found!