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PSME_00007752-RA


Description : (q9swf9|zfnl_pea : 447.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at3g02830 : 396.0) Encodes a zinc finger protein.; zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 792.0) & (original description: no original description)


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007752-RA
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_38644 No alias zinc finger ccch domain-containing protein 67 0.03 Orthogroups_2024-Update
Brara.A03862.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Brara.E03556.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 101 125
IPR000571 Znf_CCCH 317 342
IPR000571 Znf_CCCH 365 388
IPR000571 Znf_CCCH 147 171
IPR000571 Znf_CCCH 55 80
No external refs found!