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  5. PSME_00007801-RA

PSME_00007801-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007801-RA
Cluster HCCA clusters: Cluster_616

Target Alias Description ECC score Gene Family Method Actions
A4A49_19016 No alias protein tpx2 0.02 Orthogroups_2024-Update
Bradi4g27760 No alias TPX2 (targeting protein for Xklp2) protein family 0.03 Orthogroups_2024-Update
PSME_00003994-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00004278-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00004279-RA No alias (at3g01015 : 113.0) TPX2 (targeting protein for Xklp2)... 0.06 Orthogroups_2024-Update
PSME_00008406-RA No alias (at5g15510 : 162.0) TPX2 (targeting protein for Xklp2)... 0.01 Orthogroups_2024-Update
Potri.017G092100 No alias TPX2 (targeting protein for Xklp2) protein family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!