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PSME_00007986-RA


Description : (q9slx0|ima1b_orysa : 269.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (at1g09270 : 263.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)


Gene families : OG_42_0005364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007986-RA
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
PSME_00005784-RA No alias (at3g06720 : 414.0) Encodes importin alpha involved in... 0.02 Orthogroups_2024-Update
PSME_00017749-RA No alias (q9slx0|ima1b_orysa : 168.0) Importin alpha-1b subunit -... 0.01 Orthogroups_2024-Update
PSME_00019881-RA No alias (at3g06720 : 432.0) Encodes importin alpha involved in... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 123 159
IPR000225 Armadillo 165 197
IPR032413 Arm_3 219 263
No external refs found!