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Description : (at5g12030 : 128.0) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.; heat shock protein 17.6A (HSP17.6A); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: 17.6 kDa class II heat shock protein (TAIR:AT5G12020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q01545|hsp22_iponi : 124.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 256.0) & (original description: no original description)
Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00008030-RA | |
| Cluster | HCCA clusters: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_23634 | No alias | 18.1 kda class i heat shock protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_65779 | No alias | 17.6 kda class i heat shock protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g26190 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B00440.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.C00497.1 | No alias | class-C-II small heat-shock-responsive protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E01350.1 | No alias | class-C-I small heat-shock-responsive protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E01351.1 | No alias | class-C-I small heat-shock-responsive protein | 0.04 | Orthogroups_2024-Update | |
| Brara.H01093.1 | No alias | class-C-V small heat-shock-responsive protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G208000 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G043600 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G068700 | No alias | HSP20-like chaperones superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G176400 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G175700 | No alias | HSP20-like chaperones superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G099900 | No alias | 17.6 kDa class II heat shock protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G100000 | No alias | 17.6 kDa class II heat shock protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G214800 | No alias | HSP20-like chaperones superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.17G224900 | No alias | 17.6 kDa class II heat shock protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G011400 | No alias | HSP20-like chaperones superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.20G078400 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G006930.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G007500.4 | No alias | class-C-I small heat-shock-responsive protein | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G020500.1 | No alias | class-C-II small heat-shock-responsive protein | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g04380 | No alias | hsp20/alpha crystallin family protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00005055-RA | No alias | (p19242|hsp21_pea : 145.0) 17.1 kDa class II heat shock... | 0.04 | Orthogroups_2024-Update | |
| PSME_00010356-RA | No alias | (at3g51895 : 191.0) Encodes a sulfate transporter.;... | 0.05 | Orthogroups_2024-Update | |
| PSME_00023199-RA | No alias | (at5g59720 : 223.0) encodes a low molecular weight heat... | 0.04 | Orthogroups_2024-Update | |
| PSME_00033058-RA | No alias | (at5g59720 : 157.0) encodes a low molecular weight heat... | 0.04 | Orthogroups_2024-Update | |
| Potri.008G062300 | No alias | HSP20-like chaperones superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.009G147900 | No alias | HSP20-like chaperones superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.017G130700 | No alias | HSP20-like chaperones superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Pp1s105_133V6 | No alias | 17.8 kDa class I heat shock protein (Clone DCHSP17.7)... | 0.03 | Orthogroups_2024-Update | |
| Pp1s350_28V6 | No alias | contains EST AU093701(C63333) [Oryza sativa (japonica... | 0.02 | Orthogroups_2024-Update | |
| Pp1s77_290V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Seita.5G092600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.5G092700.1 | No alias | class-C-I small heat-shock-responsive protein | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G319100.1 | No alias | class-C-V small heat-shock-responsive protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G039400.1 | No alias | class-C-II small heat-shock-responsive protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G082100.1 | No alias | class-C-I small heat-shock-responsive protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G086400.1 | No alias | class-ER small heat-shock-responsive protein | 0.02 | Orthogroups_2024-Update | |
| Solyc02g080410 | No alias | Heat-shock protein, putative (AHRD V3.3 *** B9RXN2_RICCO) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
| BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
| BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Predicted GO |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0048478 | replication fork protection | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002068 | A-crystallin/Hsp20_dom | 42 | 145 |
| No external refs found! |