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PSME_00008137-RA


Description : (at2g22070 : 283.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description)


Gene families : OG_42_0122416 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008137-RA
Cluster HCCA clusters: Cluster_63


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 290 397
IPR002885 Pentatricopeptide_repeat 105 149
IPR002885 Pentatricopeptide_repeat 49 65
IPR002885 Pentatricopeptide_repeat 204 230
IPR002885 Pentatricopeptide_repeat 176 202
IPR002885 Pentatricopeptide_repeat 256 285
No external refs found!