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  5. PSME_00008141-RA

PSME_00008141-RA


Description : (at1g26560 : 505.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (p49235|bglc_maize : 440.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1010.0) & (original description: no original description)


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008141-RA
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
At1g47600 No alias Myrosinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GRX1] 0.02 Orthogroups_2024-Update
At3g62750 No alias Beta glucosidase 8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTV6] 0.03 Orthogroups_2024-Update
At4g27820 No alias Beta-glucosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9STP4] 0.03 Orthogroups_2024-Update
Bradi1g10940 No alias B-S glucosidase 44 0.02 Orthogroups_2024-Update
Bradi1g70170 No alias beta glucosidase 40 0.03 Orthogroups_2024-Update
GRMZM2G108133 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
Glyma.12G054000 No alias beta glucosidase 17 0.02 Orthogroups_2024-Update
LOC_Os04g39814 No alias Os4bglu9 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
LOC_Os08g39860 No alias Os8bglu27 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
MA_10426205g0010 No alias (at2g44480 : 377.0) beta glucosidase 17 (BGLU17);... 0.04 Orthogroups_2024-Update
MA_119280g0010 No alias (at4g21760 : 280.0) beta-glucosidase 47 (BGLU47);... 0.03 Orthogroups_2024-Update
MA_4535g0010 No alias (at1g26560 : 755.0) beta glucosidase 40 (BGLU40);... 0.04 Orthogroups_2024-Update
MA_48585g0010 No alias (at1g26560 : 521.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00005330-RA No alias (at1g02850 : 339.0) beta glucosidase 11 (BGLU11);... 0.04 Orthogroups_2024-Update
Seita.3G270400.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Seita.4G139700.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
Seita.7G164500.1 No alias coniferin beta-glucosidase & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.006G117400.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.010G240300.1 No alias beta-glucosidase involved in pollen intine formation &... 0.03 Orthogroups_2024-Update
Solyc02g080290 No alias Beta-glucosidase, putative (AHRD V3.3 *** B9RXP7_RICCO) 0.03 Orthogroups_2024-Update
Sopen02g025010 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update
Sopen07g031550 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 49 520
No external refs found!