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  5. PSME_00008241-RA

PSME_00008241-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0002280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008241-RA
Cluster HCCA clusters: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
PSME_00006193-RA No alias (at1g24090 : 100.0) RNase H family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00011445-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00013442-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014876-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00019861-RA No alias (at1g24090 : 97.1) RNase H family protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00025008-RA No alias (at1g24090 : 101.0) RNase H family protein; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00027410-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00051402-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00054516-RA No alias (at1g24090 : 85.9) RNase H family protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 109 179
IPR002156 RNaseH_domain 327 423
No external refs found!