PSME_00008430-RA

Description : (at3g47110 : 592.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 454.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1184.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00008430-RA
Cluster	HCCA clusters: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
93690	No alias	Protein kinase superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G002569	No alias	Leucine-rich receptor-like protein kinase family protein	0.04	Orthogroups_2024-Update
Glyma.07G155800	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
HORVU6Hr1G038700.2	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
HORVU6Hr1G092020.5	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g05870	No alias	receptor kinase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g40810	No alias	receptor kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g46980	No alias	receptor-like protein kinase 2 precursor, putative, expressed	0.02	Orthogroups_2024-Update
MA_168077g0010	No alias	(at3g47110 : 623.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_17328g0010	No alias	(at3g47580 : 112.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_61359g0010	No alias	(at1g34110 : 339.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00030106-RA	No alias	(at3g47110 : 609.0) Leucine-rich repeat protein kinase...	0.02	Orthogroups_2024-Update
PSME_00042436-RA	No alias	(at5g46330 : 119.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
Seita.1G036600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.1G037300.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.4G231800.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.004G214900.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.005G057700.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.010G067400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Solyc03g019980	No alias	Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO)	0.02	Orthogroups_2024-Update
Solyc06g006050	No alias	Receptor-kinase, putative (AHRD V3.3 *** B9SZK5_RICCO)	0.03	Orthogroups_2024-Update
Solyc07g006770	No alias	Receptor-like protein kinase (AHRD V3.3 *** RPK1_IPONI)	0.03	Orthogroups_2024-Update
Sopen06g002020	No alias	Leucine rich repeat	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predicted GO
CC	GO:0000786	nucleosome	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006020	inositol metabolic process	IEP	Predicted GO
BP	GO:0006066	alcohol metabolic process	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0007051	spindle organization	IEP	Predicted GO
MF	GO:0008026	ATP-dependent helicase activity	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
BP	GO:0019310	inositol catabolic process	IEP	Predicted GO
BP	GO:0019751	polyol metabolic process	IEP	Predicted GO
BP	GO:0031023	microtubule organizing center organization	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0046164	alcohol catabolic process	IEP	Predicted GO
BP	GO:0046174	polyol catabolic process	IEP	Predicted GO
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0050113	inositol oxygenase activity	IEP	Predicted GO
BP	GO:0051225	spindle assembly	IEP	Predicted GO
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predicted GO
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	727	1006
IPR001611	Leu-rich_rpt	416	438
IPR001611	Leu-rich_rpt	344	366
IPR001611	Leu-rich_rpt	266	325
IPR001611	Leu-rich_rpt	562	620
IPR001611	Leu-rich_rpt	98	157

External Links

No external refs found!

PSME_00008430-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation