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Description : (at3g10640 : 349.0) VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G04850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description)
Gene families : OG_42_0003267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003267_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00008433-RA | |
| Cluster | HCCA clusters: Cluster_43 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predicted GO |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 12 | 209 |
| No external refs found! |