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  5. PSME_00008603-RA

PSME_00008603-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008603-RA
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g16630 No alias OsFBX279 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g16700 No alias expressed protein 0.02 Orthogroups_2024-Update
Seita.2G221500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G137900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc04g079800 No alias F-box family protein (AHRD V3.3 *** B9HWR1_POPTR) 0.02 Orthogroups_2024-Update
Sopen04g013290 No alias F-box domain 0.03 Orthogroups_2024-Update
Sopen08g023490 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen11g006400 No alias F-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 12 43
No external refs found!