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  5. PSME_00008855-RA

PSME_00008855-RA


Description : (at1g19450 : 279.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G75220.1); Has 32354 Blast hits to 31683 proteins in 2302 species: Archae - 652; Bacteria - 16202; Metazoa - 5205; Fungi - 6407; Plants - 2489; Viruses - 2; Other Eukaryotes - 1397 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description)


Gene families : OG_42_0000524 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008855-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
A4A49_16306 No alias sugar transporter erd6-like 5 0.02 Orthogroups_2024-Update
A4A49_24562 No alias sugar transporter erd6-like 6 0.03 Orthogroups_2024-Update
Brara.F00564.1 No alias monosaccharide transporter *(ERD6) 0.03 Orthogroups_2024-Update
Glyma.03G149200 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Mp1g02000.1 No alias monosaccharide transporter (ERD6) 0.02 Orthogroups_2024-Update
PSME_00022527-RA No alias (at1g19450 : 433.0) Major facilitator superfamily... 0.06 Orthogroups_2024-Update
PSME_00022562-RA No alias (at5g18840 : 402.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
Seita.9G395600.1 No alias monosaccharide transporter *(ERD6) 0.02 Orthogroups_2024-Update
Sopen09g029040 No alias Sugar (and other) transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 151 381
IPR005828 MFS_sugar_transport-like 31 146
No external refs found!