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  5. PSME_00008877-RA

PSME_00008877-RA


Description : (q8w013|comt1_catro : 225.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 217.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008877-RA
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_32756 No alias trans-resveratrol di-o-methyltransferase 0.05 Orthogroups_2024-Update
At1g76790 No alias Indole glucosinolate O-methyltransferase 5... 0.02 Orthogroups_2024-Update
GRMZM2G408458 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G092840.2 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
LOC_Os07g27970 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g02840 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g07390.1 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 Orthogroups_2024-Update
PSME_00037447-RA No alias (q8w013|comt1_catro : 270.0) Caffeic acid... 0.04 Orthogroups_2024-Update
Potri.001G451100 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
Potri.013G122500 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Seita.3G179100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.6G148100.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Seita.6G174800.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Seita.8G093200.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Sobic.004G341500.1 No alias EC_2.1 transferase transferring one-carbon group 0.05 Orthogroups_2024-Update
Sobic.009G198000.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Solyc10g047520 No alias LOW QUALITY:O-methyltransferase (AHRD V3.3 *-* Q6VMV7_MENPI) 0.04 Orthogroups_2024-Update
Sopen03g028450 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 150 353
IPR012967 Plant_MeTrfase_dimerisation 37 88
No external refs found!