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  5. PSME_00008918-RA

PSME_00008918-RA


Description : (at2g26980 : 450.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 433.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: no original description)


Gene families : OG_42_0000034 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008918-RA
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_20144 No alias cbl-interacting serinethreonine-protein kinase 5 0.03 Orthogroups_2024-Update
A4A49_28511 No alias cbl-interacting protein kinase 21 0.03 Orthogroups_2024-Update
Bradi1g17250 No alias CBL-interacting protein kinase 3 0.03 Orthogroups_2024-Update
Bradi1g17820 No alias SOS3-interacting protein 1 0.03 Orthogroups_2024-Update
Bradi2g19970 No alias CBL-interacting protein kinase 12 0.02 Orthogroups_2024-Update
Brara.C01551.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Glyma.02G234800 No alias SOS3-interacting protein 1 0.03 Orthogroups_2024-Update
Glyma.09G089700 No alias CBL-interacting protein kinase 23 0.03 Orthogroups_2024-Update
Glyma.19G040400 No alias CBL-interacting protein kinase 8 0.03 Orthogroups_2024-Update
HORVU2Hr1G018340.3 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
LOC_Os09g25090 No alias CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes... 0.03 Orthogroups_2024-Update
PSME_00009482-RA No alias (at1g30270 : 676.0) Arabidopsis thaliana CBL-interacting... 0.06 Orthogroups_2024-Update
Seita.5G325400.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Seita.6G163200.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Solyc09g018280 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen08g021270 No alias Protein kinase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 10 262
IPR004041 NAF_dom 301 355
No external refs found!