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  5. PSME_00008997-RA

PSME_00008997-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00008997-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
At5g06200 No alias CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9] 0.02 Orthogroups_2024-Update
Bradi1g29070 No alias Uncharacterised protein family (UPF0497) 0.07 Orthogroups_2024-Update
Bradi2g12830 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Glyma.15G097400 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
PSME_00052040-RA No alias (at5g44550 : 92.4) Uncharacterised protein family... 0.05 Orthogroups_2024-Update
Seita.3G386300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g067330 No alias CASP-like protein (AHRD V3.3 *** K4AWY2_SOLLC) 0.02 Orthogroups_2024-Update
Sopen01g029210 No alias Domain of unknown function (DUF588) 0.02 Orthogroups_2024-Update
Sopen06g030650 No alias Domain of unknown function (DUF588) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 29 101
IPR006702 CASP_dom 149 292
No external refs found!