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  5. PSME_00009079-RA

PSME_00009079-RA


Description : (at1g65910 : 290.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7gcl7|nac74_orysa : 223.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 580.0) & (original description: no original description)


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009079-RA
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
A4A49_10514 No alias nac domain-containing protein 37 0.03 Orthogroups_2024-Update
A4A49_29314 No alias nac domain-containing protein 43 0.04 Orthogroups_2024-Update
A4A49_58267 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At1g33280 No alias NAC015 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M7] 0.03 Orthogroups_2024-Update
At1g65910 No alias NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7] 0.02 Orthogroups_2024-Update
At1g71930 No alias NAC domain-containing protein 30... 0.03 Orthogroups_2024-Update
At1g76420 No alias Protein CUP-SHAPED COTYLEDON 3... 0.02 Orthogroups_2024-Update
At2g24430 No alias NAC domain containing protein 38... 0.03 Orthogroups_2024-Update
At2g27300 No alias NAC domain-containing protein 40... 0.02 Orthogroups_2024-Update
At2g46770 No alias NAC domain-containing protein 43... 0.03 Orthogroups_2024-Update
At3g03200 No alias NAC045 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ2] 0.02 Orthogroups_2024-Update
At3g10500 No alias NAC domain-containing protein 53... 0.04 Orthogroups_2024-Update
At3g18400 No alias NAC domain containing protein 58... 0.03 Orthogroups_2024-Update
At3g29035 No alias NAC domain-containing protein 59... 0.02 Orthogroups_2024-Update
At3g61910 No alias NAC domain-containing protein 66... 0.04 Orthogroups_2024-Update
At5g22290 No alias NAC domain-containing protein 89... 0.03 Orthogroups_2024-Update
At5g61430 No alias NAC domain-containing protein 100... 0.03 Orthogroups_2024-Update
Bradi3g33957 No alias NAC domain containing protein 71 0.02 Orthogroups_2024-Update
Brara.A03785.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.B00306.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.B01408.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B03769.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.C00813.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C03560.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03105.1 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
Brara.G00213.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01307.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I01434.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01736.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G018436 No alias Arabidopsis NAC domain containing protein 87 0.02 Orthogroups_2024-Update
GRMZM2G041746 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Orthogroups_2024-Update
GRMZM2G354151 No alias NAC 007 0.03 Orthogroups_2024-Update
GRMZM2G406204 No alias NAC domain containing protein 28 0.02 Orthogroups_2024-Update
GRMZM2G456568 No alias NAC domain containing protein 82 0.03 Orthogroups_2024-Update
Glyma.01G167900 No alias vascular related NAC-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.02G070600 No alias Arabidopsis NAC domain containing protein 87 0.02 Orthogroups_2024-Update
Glyma.05G025500 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
Glyma.06G080200 No alias NAC domain containing protein 38 0.03 Orthogroups_2024-Update
Glyma.06G236000 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Glyma.07G050600 No alias NAC (No Apical Meristem) domain transcriptional... 0.05 Orthogroups_2024-Update
Glyma.08G163100 No alias NAC domain containing protein 20 0.02 Orthogroups_2024-Update
Glyma.09G167400 No alias NAC domain containing protein 57 0.02 Orthogroups_2024-Update
Glyma.11G030600 No alias NAC 007 0.02 Orthogroups_2024-Update
Glyma.11G212400 No alias NAC domain containing protein 28 0.01 Orthogroups_2024-Update
Glyma.12G226500 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Glyma.13G062000 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
Glyma.17G101500 No alias NAC domain containing protein 100 0.04 Orthogroups_2024-Update
Glyma.17G154100 No alias NAC domain containing protein 71 0.03 Orthogroups_2024-Update
Glyma.18G043900 No alias NAC domain containing protein 28 0.03 Orthogroups_2024-Update
HORVU0Hr1G000630.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G017350.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G017380.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G017400.3 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G085320.4 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G045640.7 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G075550.1 No alias NAC-type transcription factor & transcriptional... 0.01 Orthogroups_2024-Update
LOC_Os02g42970 No alias NAC domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g35170 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48550 No alias no apical meristem protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g02300 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_15204g0010 No alias (at3g03200 : 250.0) NAC domain containing protein 45... 0.03 Orthogroups_2024-Update
MA_6571438g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00050753-RA No alias (at1g79580 : 251.0) NAC-domain protein. Involved in root... 0.01 Orthogroups_2024-Update
PSME_00053123-RA No alias (at5g53950 : 278.0) Transcriptional activator of the NAC... 0.06 Orthogroups_2024-Update
Potri.001G144400 No alias NAC domain containing protein 96 0.03 Orthogroups_2024-Update
Potri.001G448400 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Potri.003G089800 No alias NAC domain containing protein 96 0.04 Orthogroups_2024-Update
Potri.003G113000 No alias NAC 007 0.03 Orthogroups_2024-Update
Potri.005G058900 No alias NAC domain containing protein 82 0.03 Orthogroups_2024-Update
Potri.008G031800 No alias NAC domain containing protein 2 0.04 Orthogroups_2024-Update
Potri.010G176600 No alias NAC (No Apical Meristem) domain transcriptional... 0.07 Orthogroups_2024-Update
Potri.011G153300 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Orthogroups_2024-Update
Potri.012G001400 No alias NAC domain containing protein 100 0.05 Orthogroups_2024-Update
Potri.013G092400 No alias NAC domain containing protein 70 0.03 Orthogroups_2024-Update
Potri.015G030200 No alias NAC domain containing protein 57 0.03 Orthogroups_2024-Update
Pp1s161_73V6 No alias nac domain-containing 0.02 Orthogroups_2024-Update
Pp1s223_12V6 No alias nac domain ipr003441 0.03 Orthogroups_2024-Update
Seita.5G403000.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G124900.1 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
Seita.9G314000.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G386000.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G290900.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G302400.3 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G022400.1 No alias NAC-type transcription factor & transcriptional... 0.02 Orthogroups_2024-Update
Solyc02g084350 No alias NAC domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g115850 No alias NAC domain-containing protein 0.03 Orthogroups_2024-Update
Solyc06g034340 No alias NAC domain protein, (AHRD V3.3 *** A0A061G781_THECC) 0.03 Orthogroups_2024-Update
Solyc06g065410 No alias NAC domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g074170 No alias NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC) 0.03 Orthogroups_2024-Update
Solyc08g008660 No alias NAC domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc08g077110 No alias NAC domain protein, (AHRD V3.3 *** A0A061GAH7_THECC) 0.05 Orthogroups_2024-Update
Solyc11g008000 No alias NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC) 0.03 Orthogroups_2024-Update
Sopen03g034840 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update
Sopen11g003870 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 7 133
No external refs found!