PSME_00009155-RA


Description : (at5g59850 : 178.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9at34|rs15a_dauca : 175.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 356.0) & (original description: no original description)


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009155-RA
Cluster HCCA clusters: Cluster_547

Target Alias Description ECC score Gene Family Method Actions
PSME_00014701-RA No alias (at3g46040 : 196.0) Regulated by TCP20.; ribosomal... 0.03 Orthogroups_2024-Update
PSME_00053500-RA No alias (at5g59850 : 169.0) Ribosomal protein S8 family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 79 112
IPR000630 Ribosomal_S8 14 73
No external refs found!