PSME_00009315-RA


Description : (at5g13000 : 323.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 646.0) & (original description: no original description)


Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009315-RA
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_11454 No alias callose synthase 12 0.03 Orthogroups_2024-Update
HORVU2Hr1G046930.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Kfl00500_0040 kfl00500_0040_v1.1 (at2g13680 : 1902.0) Responsible for the synthesis of... 0.01 Orthogroups_2024-Update
PSME_00000908-RA No alias (at2g13680 : 239.0) Responsible for the synthesis of... 0.02 Orthogroups_2024-Update
Potri.013G131301 No alias glucan synthase-like 5 0.02 Orthogroups_2024-Update
Solyc07g061920 No alias glucan synthase-like 4 (AHRD V3.3 *** AT3G14570.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA InterProScan predictions
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA InterProScan predictions
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 44 201
No external refs found!