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  5. PSME_00009484-RA

PSME_00009484-RA


Description : (at3g17630 : 186.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)


Gene families : OG_42_0000316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000316_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009484-RA
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi2g53320 No alias cation/hydrogen exchanger 15 0.02 Orthogroups_2024-Update
GRMZM2G439306 No alias cation/H+ exchanger 19 0.03 Orthogroups_2024-Update
Glyma.03G171500 No alias cation/H+ exchanger 20 0.02 Orthogroups_2024-Update
Glyma.05G192400 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Glyma.19G230900 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
PSME_00011808-RA No alias (at3g17630 : 160.0) member of Putative Na+/H+ antiporter... 0.08 Orthogroups_2024-Update
PSME_00033720-RA No alias (at3g17630 : 366.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
Potri.003G134900 No alias cation/H+ exchanger 18 0.02 Orthogroups_2024-Update
Potri.010G166900 No alias cation/H+ exchanger 20 0.03 Orthogroups_2024-Update
Pp1s270_2V6 No alias cation proton exchanger 0.03 Orthogroups_2024-Update
Seita.3G295000.1 No alias proton 0.03 Orthogroups_2024-Update
Seita.3G391700.1 No alias proton 0.04 Orthogroups_2024-Update
Seita.5G359700.1 No alias proton 0.05 Orthogroups_2024-Update
Sobic.001G027900.1 No alias proton 0.05 Orthogroups_2024-Update
Solyc08g008200 No alias Cation/H(+) antiporter (AHRD V3.3 *** A0A0K9NMD6_ZOSMR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA InterProScan predictions
MF GO:0015299 solute:proton antiporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 27 238
No external refs found!