PSME_00009507-RA

Description : (at3g23730 : 294.0) xyloglucan endotransglucosylase/hydrolase 16 (XTH16); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 15 (TAIR:AT4G14130.1); Has 2187 Blast hits to 2165 proteins in 308 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 414; Plants - 1389; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (q41542|xth_wheat : 288.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 572.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00009507-RA
Cluster	HCCA clusters: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15625	No alias	xyloglucan endotransglucosylasehydrolase 1	0.03	Orthogroups_2024-Update
A4A49_30032	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.03	Orthogroups_2024-Update
A4A49_36014	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.03	Orthogroups_2024-Update
At4g25820	No alias	Xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
At5g65730	No alias	Xyloglucan endotransglucosylase/hydrolase...	0.02	Orthogroups_2024-Update
Bradi1g27867	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.04	Orthogroups_2024-Update
Bradi1g33810	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
Bradi1g33827	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
Bradi1g33840	No alias	xyloglucan endotransglucosylase/hydrolase 25	0.03	Orthogroups_2024-Update
Bradi4g16990	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
Glyma.09G062600	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
Glyma.17G065300	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
LOC_Os03g01800	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
MA_15222g0020	No alias	(at3g44990 : 243.0) xyloglucan endo-transglycosylase;...	0.06	Orthogroups_2024-Update
MA_46026g0020	No alias	(at4g03210 : 242.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
MA_848882g0010	No alias	(at5g65730 : 338.0) xyloglucan...	0.03	Orthogroups_2024-Update
MA_926271g0010	No alias	(at2g36870 : 160.0) xyloglucan...	0.03	Orthogroups_2024-Update
Mp2g17820.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00000083-RA	No alias	(at2g36870 : 334.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00010987-RA	No alias	(at3g44990 : 278.0) xyloglucan endo-transglycosylase;...	0.03	Orthogroups_2024-Update
PSME_00017708-RA	No alias	(at4g03210 : 291.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00025833-RA	No alias	(at5g65730 : 294.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00028627-RA	No alias	(q41638\|xtha_phaan : 479.0) Xyloglucan...	0.06	Orthogroups_2024-Update
PSME_00028860-RA	No alias	(at5g13870 : 246.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
PSME_00037525-RA	No alias	(p35694\|bru1_soybn : 350.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
Potri.003G159700	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
Potri.018G094800	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.02	Orthogroups_2024-Update
Pp1s193_16V6	No alias	MAC12.33; xyloglucan endotransglycosylase (EXGT-A4)...	0.05	Orthogroups_2024-Update
Pp1s309_28V6	No alias	xyloglucan endotransglycosylase	0.03	Orthogroups_2024-Update
Solyc07g055990	No alias	Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1...	0.02	Orthogroups_2024-Update
Solyc09g092520	No alias	xyloglucan endotransglycosylase	0.03	Orthogroups_2024-Update
Solyc11g065600	No alias	xyloglucan endotransglucosylase-hydrolase 4	0.05	Orthogroups_2024-Update
Sopen09g035420	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000757	GH16	45	224
IPR010713	XET_C	251	297

External Links

No external refs found!

PSME_00009507-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation