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  5. PSME_00009547-RA

PSME_00009547-RA


Description : (at4g17500 : 103.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q40479|erf2_tobac : 99.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 206.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009547-RA
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
80895 No alias ethylene responsive element binding factor 2 0.03 Orthogroups_2024-Update
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.05 Orthogroups_2024-Update
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_16579 No alias ethylene-responsive transcription factor abr1 0.03 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.03 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.03 Orthogroups_2024-Update
A4A49_21042 No alias ethylene-responsive transcription factor 4 0.02 Orthogroups_2024-Update
A4A49_23010 No alias ethylene-responsive transcription factor 2 0.02 Orthogroups_2024-Update
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.03 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.03 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.03 Orthogroups_2024-Update
A4A49_30738 No alias ethylene-responsive transcription factor abr1 0.03 Orthogroups_2024-Update
A4A49_39806 No alias ethylene-responsive transcription factor erf119 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.03 Orthogroups_2024-Update
AC209257.4_FG006 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At2g35700 No alias ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3] 0.02 Orthogroups_2024-Update
At3g23230 No alias Ethylene-responsive transcription factor ERF098... 0.04 Orthogroups_2024-Update
At5g18560 No alias PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3] 0.03 Orthogroups_2024-Update
At5g19790 No alias Ethylene-responsive transcription factor RAP2-11... 0.03 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.02 Orthogroups_2024-Update
Bradi1g36590 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g52370 No alias erf domain protein 9 0.01 Orthogroups_2024-Update
Bradi2g60331 No alias C-repeat/DRE binding factor 1 0.02 Orthogroups_2024-Update
Bradi3g06562 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Bradi4g35580 No alias C-repeat/DRE binding factor 1 0.03 Orthogroups_2024-Update
Bradi5g17610 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00380.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Brara.A02664.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.A03039.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.A03156.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.C00977.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.F00821.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.G00520.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G02121.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.G02253.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.G02403.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G03053.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.03 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K00056.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
GRMZM2G061487 No alias related to AP2 4 0.02 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G085678 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
GRMZM2G149756 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G156006 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G173771 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
GRMZM2G380377 No alias dehydration response element B1A 0.02 Orthogroups_2024-Update
GRMZM2G481668 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Glyma.01G074200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G231000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G232000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Glyma.03G162400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G148400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G027000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G036700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.02 Orthogroups_2024-Update
Glyma.11G239200 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Glyma.12G162700 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G233900 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.15G095600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G219700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G206600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G163700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G070000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G172800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G197000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G203500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G103660.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46400 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g28350 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g41780 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_12547g0010 No alias (at5g25810 : 85.9) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_7202656g0010 No alias (at1g74930 : 83.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_8552524g0010 No alias (q9lw50|erf2_nicsy : 135.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
MA_896002g0010 No alias (at5g11590 : 147.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00004892-RA No alias (at1g19210 : 123.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
PSME_00007285-RA No alias (at5g50080 : 84.0) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00026873-RA No alias (at5g11590 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.05 Orthogroups_2024-Update
PSME_00052454-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00053215-RA No alias (at4g17490 : 92.0) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
PSME_00053842-RA No alias (at5g21960 : 117.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00054473-RA No alias (at5g64750 : 103.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.03 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G121200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G187001 No alias C-repeat/DRE binding factor 2 0.04 Orthogroups_2024-Update
Potri.008G215600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.04 Orthogroups_2024-Update
Potri.013G158500 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.014G046700 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Pp1s204_42V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s233_111V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G174100.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.7G205100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G378900.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G481300.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G269100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G171300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G179900.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G283201.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G308900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Sobic.006G184800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G156700.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G016500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g077360 No alias Ethylene Response Factor B.2 0.03 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.02 Orthogroups_2024-Update
Solyc04g051360 No alias Ethylene Response Factor D.1 0.03 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc09g089920 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g076370 No alias Dehydration-responsive element binding protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen03g024370 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g035520 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030590 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen05g030600 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g004160 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen12g003310 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 266 316
No external refs found!