PSME_00009648-RA

Description : (at4g35290 : 566.0) Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family; glutamate receptor 2 (GLUR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular sodium ion homeostasis, cellular potassium ion homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT2G17260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 511.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 1132.0) & (original description: no original description)

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00009648-RA
Cluster	HCCA clusters: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
At2g29100	No alias	Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]	0.02	Orthogroups_2024-Update
Bradi3g53690	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Bradi4g30840	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Glyma.11G087100	No alias	glutamate receptor 3.6	0.03	Orthogroups_2024-Update
Glyma.12G099500	No alias	glutamate receptor 3.4	0.05	Orthogroups_2024-Update
LOC_Os02g02540	No alias	glutamate receptor, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00001291-RA	No alias	(at4g35290 : 534.0) Encodes a putative glutamate...	0.03	Orthogroups_2024-Update
PSME_00007782-RA	No alias	(at2g17260 : 247.0) Encodes a glutamate receptor....	0.05	Orthogroups_2024-Update
PSME_00010771-RA	No alias	(at1g42540 : 809.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00020365-RA	No alias	(at2g29120 : 505.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00021964-RA	No alias	(at1g05200 : 282.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00033212-RA	No alias	(at1g42540 : 242.0) member of Putative ligand-gated ion...	0.04	Orthogroups_2024-Update
Potri.004G052400	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
Potri.006G268500	No alias	glutamate receptor 2.8	0.02	Orthogroups_2024-Update
Seita.2G212500.1	No alias	ligand-gated cation channel *(GLR)	0.07	Orthogroups_2024-Update
Seita.7G214000.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Solyc06g063180	No alias	glutamate receptor-like 2.2	0.03	Orthogroups_2024-Update
Sopen02g022210	No alias	Receptor family ligand binding region	0.03	Orthogroups_2024-Update
evm.model.contig_3514.1	No alias	(at4g35290 : 111.0) Encodes a putative glutamate...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	53	413
IPR001320	Iontro_rcpt	810	840
IPR001638	Solute-binding_3/MltF_N	495	809

External Links

No external refs found!

PSME_00009648-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation