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  5. PSME_00009649-RA

PSME_00009649-RA


Description : (at4g35290 : 475.0) Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family; glutamate receptor 2 (GLUR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular sodium ion homeostasis, cellular potassium ion homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT2G17260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 427.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 950.0) & (original description: no original description)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009649-RA
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
A4A49_28968 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
A4A49_37064 No alias glutamate receptor 3.2 0.02 Orthogroups_2024-Update
At2g17260 No alias glutamate receptor 2 [Source:TAIR;Acc:AT2G17260] 0.02 Orthogroups_2024-Update
At2g24710 No alias glutamate receptor 2.3 [Source:TAIR;Acc:AT2G24710] 0.03 Orthogroups_2024-Update
At5g11180 No alias Glutamate receptor 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN8] 0.03 Orthogroups_2024-Update
At5g27100 No alias Glutamate receptor 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O04660] 0.03 Orthogroups_2024-Update
Bradi1g26030 No alias glutamate receptor 3.4 0.02 Orthogroups_2024-Update
Bradi4g30850 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Bradi4g30880 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Brara.A00302.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.I03484.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
GRMZM2G302673 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Glyma.11G087100 No alias glutamate receptor 3.6 0.03 Orthogroups_2024-Update
Glyma.13G233400 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Glyma.14G001100 No alias glutamate receptor 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G036590.3 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU2Hr1G045730.11 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU2Hr1G049510.4 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU2Hr1G064530.8 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063510.2 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU6Hr1G083680.2 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
HORVU7Hr1G031430.5 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
HORVU7Hr1G031700.13 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
LOC_Os09g31160 No alias glutamate receptor precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432703g0020 No alias (q7xp59|glr31_orysa : 244.0) Glutamate receptor 3.1... 0.04 Orthogroups_2024-Update
MA_9224859g0010 No alias (at4g35290 : 187.0) Encodes a putative glutamate... 0.05 Orthogroups_2024-Update
PSME_00001097-RA No alias (at2g29120 : 619.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00001291-RA No alias (at4g35290 : 534.0) Encodes a putative glutamate... 0.04 Orthogroups_2024-Update
PSME_00007782-RA No alias (at2g17260 : 247.0) Encodes a glutamate receptor.... 0.05 Orthogroups_2024-Update
PSME_00010771-RA No alias (at1g42540 : 809.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00021963-RA No alias (at1g05200 : 294.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00021964-RA No alias (at1g05200 : 282.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00023170-RA No alias (at1g42540 : 830.0) member of Putative ligand-gated ion... 0.05 Orthogroups_2024-Update
PSME_00027643-RA No alias (at2g29120 : 565.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00032127-RA No alias (at4g35290 : 436.0) Encodes a putative glutamate... 0.06 Orthogroups_2024-Update
Potri.002G007400 No alias glutamate receptor 3.3 0.02 Orthogroups_2024-Update
Potri.004G052500 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Potri.006G268700 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Potri.006G269100 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Potri.011G062750 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Potri.011G062900 No alias glutamate receptor 2.7 0.05 Orthogroups_2024-Update
Potri.018G009800 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Potri.018G010400 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Potri.018G010800 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Seita.1G346100.1 No alias ligand-gated cation channel *(GLR) 0.05 Orthogroups_2024-Update
Seita.2G212600.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G209100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.004G324000.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.006G193200.3 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Sobic.010G231500.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Solyc06g063190 No alias glutamate receptor-like 2.3 0.03 Orthogroups_2024-Update
Sopen05g026960 No alias Receptor family ligand binding region 0.03 Orthogroups_2024-Update
evm.model.contig_3514.1 No alias (at4g35290 : 111.0) Encodes a putative glutamate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 594 721
IPR001828 ANF_lig-bd_rcpt 57 415
IPR001638 Solute-binding_3/MltF_N 495 804
No external refs found!