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PSME_00009807-RA


Description : (at3g05500 : 103.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 99.8) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 206.0) & (original description: no original description)


Gene families : OG_42_0007819 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009807-RA

Target Alias Description ECC score Gene Family Method Actions
PSME_00039168-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008802 REF 134 271
IPR008802 REF 86 132
IPR008802 REF 51 89
IPR002921 Fungal_lipase-like 383 482
No external refs found!