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  5. PSME_00009889-RA

PSME_00009889-RA


Description : (at1g11530 : 120.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (q07090|trxh2_tobac : 90.9) Thioredoxin H-type 2 (TRX-H2) - Nicotiana tabacum (Common tobacco) & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0002486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009889-RA
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22770 No alias C-terminal cysteine residue is changed to a serine 1 0.03 Orthogroups_2024-Update
PSME_00000418-RA No alias (at1g11530 : 118.0) Encodes a monocysteinic thioredoxin,... 0.04 Orthogroups_2024-Update
PSME_00014844-RA No alias (at1g11530 : 114.0) Encodes a monocysteinic thioredoxin,... 0.04 Orthogroups_2024-Update
PSME_00032679-RA No alias (at1g11530 : 103.0) Encodes a monocysteinic thioredoxin,... 0.04 Orthogroups_2024-Update
PSME_00046267-RA No alias (at1g11530 : 107.0) Encodes a monocysteinic thioredoxin,... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 27 112
No external refs found!