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  5. PSME_00009900-RA

PSME_00009900-RA


Description : (at2g02450 : 172.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 145.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0001168 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009900-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g04070 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_802073g0010 No alias (at2g02450 : 164.0) NAC domain containing protein 35... 0.03 Orthogroups_2024-Update
PSME_00008237-RA No alias (at2g02450 : 125.0) NAC domain containing protein 35... 0.04 Orthogroups_2024-Update
PSME_00009982-RA No alias (at2g17040 : 160.0) Member of the NAC transcription... 0.04 Orthogroups_2024-Update
PSME_00011889-RA No alias (at2g02450 : 176.0) NAC domain containing protein 35... 0.04 Orthogroups_2024-Update
PSME_00040434-RA No alias (at2g02450 : 172.0) NAC domain containing protein 35... 0.06 Orthogroups_2024-Update
PSME_00052169-RA No alias (at2g02450 : 171.0) NAC domain containing protein 35... 0.05 Orthogroups_2024-Update
Potri.004G181900 No alias NAC domain containing protein 36 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 19 146
No external refs found!