PSME_00009971-RA

Description : (o65039|cysep_ricco : 395.0) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase) - Ricinus communis (Castor bean) & (at5g50260 : 392.0) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT3G48340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 784.0) & (original description: no original description)

Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00009971-RA
Cluster	HCCA clusters: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
139792	No alias	xylem bark cysteine peptidase 3	0.03	Orthogroups_2024-Update
A4A49_02294	No alias	cysteine protease xcp1	0.03	Orthogroups_2024-Update
A4A49_05607	No alias	putative cysteine protease rd21b	0.03	Orthogroups_2024-Update
A4A49_16637	No alias	cysteine protease xcp2	0.04	Orthogroups_2024-Update
At1g06260	No alias	Cysteine proteinases superfamily protein...	0.03	Orthogroups_2024-Update
At1g20850	No alias	Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]	0.03	Orthogroups_2024-Update
At4g36880	No alias	CP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UST0]	0.03	Orthogroups_2024-Update
Bradi2g39320	No alias	xylem cysteine peptidase 1	0.06	Orthogroups_2024-Update
Brara.A00157.1	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	Orthogroups_2024-Update
Brara.A00297.1	No alias	C1-class subclass RD21/XCP thiol protease & Prgrammed...	0.03	Orthogroups_2024-Update
Brara.B02488.1	No alias	C1-class subclass RD21/XCP thiol protease & EC_3.4...	0.02	Orthogroups_2024-Update
Brara.H02309.1	No alias	C1-class subclass RD21/XCP thiol protease & Prgrammed...	0.03	Orthogroups_2024-Update
GRMZM2G006377	No alias	xylem bark cysteine peptidase 3	0.02	Orthogroups_2024-Update
LOC_Os01g73980	No alias	xylem cysteine proteinase 2 precursor, putative, expressed	0.05	Orthogroups_2024-Update
LOC_Os02g48450	No alias	xylem cysteine proteinase 2 precursor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g01810	No alias	xylem cysteine proteinase 2 precursor, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00038036-RA	No alias	(at3g19390 : 313.0) Granulin repeat cysteine protease...	0.01	Orthogroups_2024-Update
Pp1s19_362V6	No alias	cysteine protease	0.02	Orthogroups_2024-Update
Pp1s49_32V6	No alias	cysteine protease	0.03	Orthogroups_2024-Update
Seita.3G067600.1	No alias	C1-class subclass RD21/XCP thiol protease & Prgrammed...	0.03	Orthogroups_2024-Update
Solyc04g080880	No alias	Cysteine protease family protein (AHRD V3.3 *** B9H4H0_POPTR)	0.02	Orthogroups_2024-Update
Solyc04g082710	No alias	Cysteine protease, putative (AHRD V3.3 *** B9R8S7_RICCO)	0.02	Orthogroups_2024-Update
Sopen04g036340	No alias	Papain family cysteine protease	0.04	Orthogroups_2024-Update
Sopen12g030570	No alias	Papain family cysteine protease	0.03	Orthogroups_2024-Update
Sopen12g031600	No alias	Papain family cysteine protease	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000668	Peptidase_C1A_C	518	735
IPR000668	Peptidase_C1A_C	170	387
IPR013201	Prot_inhib_I29	80	136
IPR013201	Prot_inhib_I29	428	484

External Links

No external refs found!

PSME_00009971-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation