1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00009995-RA

PSME_00009995-RA


Description : (at1g09270 : 283.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2.; importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 276.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (reliability: 566.0) & (original description: no original description)


Gene families : OG_42_0122748 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009995-RA
Cluster HCCA clusters: Cluster_24


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 269 301
IPR000225 Armadillo 230 263
IPR000225 Armadillo 162 200
IPR032413 Arm_3 323 367
No external refs found!