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  5. PSME_00010141-RA

PSME_00010141-RA


Description : (at5g01750 : 161.0) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0000351 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010141-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_18591 No alias protein lurp-one-related 14 0.04 Orthogroups_2024-Update
A4A49_40421 No alias protein lurp-one-related 15 0.04 Orthogroups_2024-Update
Brara.A03032.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.A03389.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I04773.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp6g17240.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.008G075100 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
Pp1s127_40V6 No alias F26K24.3; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G089100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G038900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G039000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G082800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 70 244
No external refs found!