1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00010154-RA

PSME_00010154-RA


Description : (at1g22690 : 83.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 166.4) & (original description: no original description)


Gene families : OG_42_0000952 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000952_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010154-RA
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
At1g75750 No alias GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5] 0.02 Orthogroups_2024-Update
Glyma.06G185300 No alias Gibberellin-regulated family protein 0.03 Orthogroups_2024-Update
PSME_00009345-RA No alias (at5g14920 : 97.8) Gibberellin-regulated family protein;... 0.04 Orthogroups_2024-Update
Potri.015G071500 No alias Gibberellin-regulated family protein 0.02 Orthogroups_2024-Update
Sopen01g053140 No alias Gibberellin regulated protein 0.03 Orthogroups_2024-Update
Sopen02g028670 No alias Gibberellin regulated protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003854 GASA 2 61
No external refs found!