PSME_00010162-RA

Description : no hits & (original description: no original description)

Gene families : OG_42_0006617 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006617_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00010162-RA
Cluster	HCCA clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
A4A49_57865	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
Glyma.20G180500	No alias	Function unknown	0.04	Orthogroups_2024-Update
Pp1s218_23V6	No alias	No description available	0.02	Orthogroups_2024-Update
Seita.4G055700.1	No alias	assembly factor (COX16) of cytochrome c oxidase assembly	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	IEA	InterProScan predictions
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044429	mitochondrial part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR020164	Cyt_c_Oxase_assmbl_COX16	34	89

External Links

No external refs found!