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  5. PSME_00010279-RA

PSME_00010279-RA


Description : (at4g02780 : 364.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 353.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 728.0) & (original description: no original description)


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010279-RA
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
407280 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Orthogroups_2024-Update
At3g25830 No alias 1,8-cineole synthase 2, chloroplastic... 0.02 Orthogroups_2024-Update
At4g16740 No alias Tricyclene synthase, chloroplastic... 0.03 Orthogroups_2024-Update
Glyma.13G321100 No alias terpene synthase 03 0.03 Orthogroups_2024-Update
HORVU7Hr1G111960.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
MA_10196363g0010 No alias (p59287|cass_ricco : 245.0) Casbene synthase,... 0.05 Orthogroups_2024-Update
MA_10426551g0010 No alias (p59287|cass_ricco : 248.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
MA_10435955g0010 No alias (o04408|ksa_pea : 162.0) Ent-kaurene synthase A,... 0.07 Orthogroups_2024-Update
MA_111325g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_1830g0010 No alias (p59287|cass_ricco : 269.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
MA_328490g0010 No alias (p93665|dcs1_goshi : 244.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
MA_491032g0010 No alias (at4g02780 : 134.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
MA_70145g0010 No alias (at4g16740 : 253.0) Encodes an (E,E)-alpha-farnesene... 0.05 Orthogroups_2024-Update
MA_8002141g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_9401581g0010 No alias (o04408|ksa_pea : 146.0) Ent-kaurene synthase A,... 0.07 Orthogroups_2024-Update
PSME_00003265-RA No alias (at4g02780 : 372.0) Catalyzes the conversion of... 0.05 Orthogroups_2024-Update
PSME_00003483-RA No alias (p93665|dcs1_goshi : 253.0) (+)-delta-cadinene synthase... 0.05 Orthogroups_2024-Update
PSME_00004472-RA No alias (at3g25810 : 152.0) Terpenoid cyclases/Protein... 0.05 Orthogroups_2024-Update
PSME_00007190-RA No alias (at3g25810 : 158.0) Terpenoid cyclases/Protein... 0.04 Orthogroups_2024-Update
PSME_00007330-RA No alias (at4g16740 : 150.0) Encodes an (E,E)-alpha-farnesene... 0.05 Orthogroups_2024-Update
PSME_00007443-RA No alias (p93665|dcs1_goshi : 257.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00017295-RA No alias (at4g02780 : 133.0) Catalyzes the conversion of... 0.05 Orthogroups_2024-Update
PSME_00025552-RA No alias (p59287|cass_ricco : 251.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
PSME_00033445-RA No alias (p93665|dcs1_goshi : 196.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00035829-RA No alias (q40577|5eas_tobac : 197.0) Aristolochene synthase (EC... 0.04 Orthogroups_2024-Update
PSME_00039853-RA No alias (at4g02780 : 169.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.05 Orthogroups_2024-Update
Sobic.006G027500.2 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Solyc01g105860 No alias (R)-limonene synthase (AHRD V1 ***- B9T537_RICCO)%3B... 0.03 Orthogroups_2024-Update
Solyc01g105900 No alias Beta myrcene/limonene synthase (AHRD V3.3 *** G1JUH4_SOLLC) 0.03 Orthogroups_2024-Update
Solyc01g105960 No alias (E)-beta-ocimene synthase 0.03 Orthogroups_2024-Update
Sopen01g048320 No alias Terpene synthase, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 517 784
IPR001906 Terpene_synth_N 267 474
No external refs found!