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  5. PSME_00010293-RA

PSME_00010293-RA


Description : (at5g58070 : 207.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description)


Gene families : OG_42_0003241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010293-RA
Cluster HCCA clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00001284.2 No alias (at5g58070 : 82.8) Encodes a temperature-induced... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 12 159
IPR000566 Lipocln_cytosolic_FA-bd_dom 179 274
No external refs found!