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  5. PSME_00010408-RA

PSME_00010408-RA


Description : (at5g52390 : 159.0) PAR1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: PAR1 (InterPro:IPR009489); BEST Arabidopsis thaliana protein match is: PAR1 protein (TAIR:AT3G54040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0000813 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010408-RA
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_32901 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Glyma.01G108700 No alias PAR1 protein 0.03 Orthogroups_2024-Update
PSME_00003406-RA No alias (at5g52390 : 158.0) PAR1 protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00020342-RA No alias (at5g52390 : 147.0) PAR1 protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00044160-RA No alias (at5g52390 : 154.0) PAR1 protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00050160-RA No alias (at5g52390 : 160.0) PAR1 protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009489 PAR1 28 155
No external refs found!