1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00010576-RA

PSME_00010576-RA


Description : "(at2g46950 : 280.0) member of CYP709B; ""cytochrome P450, family 709, subfamily B, polypeptide 2"" (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q05047|c72a1_catro : 213.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 560.0) & (original description: no original description)"


Gene families : OG_42_0000028 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010576-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
170849 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.02 Orthogroups_2024-Update
A4A49_15844 No alias cytochrome p450 734a1 0.02 Orthogroups_2024-Update
A4A49_23631 No alias cytochrome p450 cyp72a219 0.03 Orthogroups_2024-Update
At2g26710 No alias CYP734A1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRF1] 0.03 Orthogroups_2024-Update
Bradi3g40710 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.05 Orthogroups_2024-Update
Bradi4g36680 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.02 Orthogroups_2024-Update
Glyma.10G088200 No alias cytochrome P450, family 721, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
LOC_Os01g43774 No alias cytochrome P450 72A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_218197g0020 No alias "(at2g46960 : 125.0) member of CYP709B; ""cytochrome... 0.03 Orthogroups_2024-Update
PSME_00001439-RA No alias "(at1g67110 : 495.0) member of CYP709A; ""cytochrome... 0.03 Orthogroups_2024-Update
PSME_00009487-RA No alias (at2g26710 : 497.0) Encodes a member of the cytochrome... 0.03 Orthogroups_2024-Update
PSME_00016149-RA No alias "(at1g67110 : 484.0) member of CYP709A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00028911-RA No alias "(at2g46950 : 288.0) member of CYP709B; ""cytochrome... 0.06 Orthogroups_2024-Update
PSME_00043624-RA No alias (at2g26710 : 210.0) Encodes a member of the cytochrome... 0.04 Orthogroups_2024-Update
Potri.010G139400 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Pp1s235_95V6 No alias cytochrome p450-like protein 0.02 Orthogroups_2024-Update
Seita.2G404400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.4G121400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G156200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.003G228200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Sobic.003G228500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.003G229200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.004G086400.1 No alias brassinosteroid hydroxylase *(CYP72B) & EC_1.14... 0.03 Orthogroups_2024-Update
Solyc06g067930 No alias Cytochrome P450, putative (AHRD V3.3 *** B9SEM0_RICCO) 0.02 Orthogroups_2024-Update
Solyc07g055560 No alias Cytochrome P450 (AHRD V3.3 *** A0A124SAX2_CYNCS) 0.05 Orthogroups_2024-Update
Sopen00g009630 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen02g030570 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen07g021030 No alias Cytochrome P450 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 89 380
No external refs found!