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  5. PSME_00010687-RA

PSME_00010687-RA


Description : (at2g39830 : 370.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 740.0) & (original description: no original description)


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010687-RA
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
A4A49_09577 No alias protein da1-related 2 0.03 Orthogroups_2024-Update
Brara.C02034.1 No alias ubiquitin-dependent protease *(DA1) 0.03 Orthogroups_2024-Update
Potri.010G197500 No alias DA1-related protein 2 0.04 Orthogroups_2024-Update
Pp1s395_19V6 No alias zinc ion binding 0.03 Orthogroups_2024-Update
Seita.8G110500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022087 DA1-like 45 253
No external refs found!