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  5. PSME_00010722-RA

PSME_00010722-RA


Description : (at2g33380 : 264.0) Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress.; RESPONSIVE TO DESSICATION 20 (RD20); FUNCTIONS IN: lipoxygenase activity, calcium ion binding; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast membrane, microsome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: caleosin-related family protein (TAIR:AT5G29560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) & (original description: no original description)


Gene families : OG_42_0000496 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010722-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
A4A49_01277 No alias peroxygenase 0.03 Orthogroups_2024-Update
At1g23250 No alias Probable inactive peroxygenase-like protein... 0.02 Orthogroups_2024-Update
Glyma.09G124200 No alias Caleosin-related family protein 0.02 Orthogroups_2024-Update
Glyma.19G247500 No alias ARABIDOPSIS THALIANA PEROXYGENASE 2 0.03 Orthogroups_2024-Update
HORVU7Hr1G041470.1 No alias Caleosin-type peroxygenase 0.03 Orthogroups_2024-Update
Kfl00546_0060 kfl00546_0060_v1.... (at2g33380 : 181.0) Encodes a calcium binding protein... 0.01 Orthogroups_2024-Update
MA_10428346g0010 No alias (at2g33380 : 170.0) Encodes a calcium binding protein... 0.04 Orthogroups_2024-Update
MA_167502g0010 No alias (at2g33380 : 242.0) Encodes a calcium binding protein... 0.03 Orthogroups_2024-Update
MA_19224g0010 No alias (at5g29560 : 181.0) caleosin-related family protein;... 0.03 Orthogroups_2024-Update
PSME_00010725-RA No alias (at2g33380 : 273.0) Encodes a calcium binding protein... 0.05 Orthogroups_2024-Update
Potri.010G107932 No alias Caleosin-related family protein 0.05 Orthogroups_2024-Update
Sobic.010G104600.1 No alias Caleosin-type peroxygenase 0.02 Orthogroups_2024-Update
Sopen04g001770 No alias Caleosin related protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007736 Caleosin-related 59 226
No external refs found!