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  5. PSME_00010725-RA

PSME_00010725-RA


Description : (at2g33380 : 273.0) Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress.; RESPONSIVE TO DESSICATION 20 (RD20); FUNCTIONS IN: lipoxygenase activity, calcium ion binding; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast membrane, microsome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: caleosin-related family protein (TAIR:AT5G29560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 546.0) & (original description: no original description)


Gene families : OG_42_0000496 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010725-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_01277 No alias peroxygenase 0.01 Orthogroups_2024-Update
At1g23240 No alias Caleosin-related family protein [Source:TAIR;Acc:AT1G23240] 0.02 Orthogroups_2024-Update
At4g26740 No alias Peroxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O81270] 0.02 Orthogroups_2024-Update
Brara.C01702.1 No alias Caleosin-type peroxygenase 0.03 Orthogroups_2024-Update
Brara.D02028.1 No alias Caleosin-type peroxygenase 0.02 Orthogroups_2024-Update
GRMZM2G040121 No alias Caleosin-related family protein 0.03 Orthogroups_2024-Update
Glyma.09G124200 No alias Caleosin-related family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G088640.2 No alias Caleosin-type peroxygenase 0.03 Orthogroups_2024-Update
HORVU6Hr1G073690.3 No alias Caleosin-type peroxygenase 0.02 Orthogroups_2024-Update
HORVU7Hr1G041470.1 No alias Caleosin-type peroxygenase 0.02 Orthogroups_2024-Update
LOC_Os04g43170 No alias caleosin related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g43200 No alias caleosin related protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428346g0010 No alias (at2g33380 : 170.0) Encodes a calcium binding protein... 0.03 Orthogroups_2024-Update
MA_524071g0010 No alias (at5g29560 : 119.0) caleosin-related family protein;... 0.03 Orthogroups_2024-Update
PSME_00010722-RA No alias (at2g33380 : 264.0) Encodes a calcium binding protein... 0.05 Orthogroups_2024-Update
PSME_00028753-RA No alias (at2g33380 : 110.0) Encodes a calcium binding protein... 0.01 Orthogroups_2024-Update
PSME_00045296-RA No alias (at2g33380 : 276.0) Encodes a calcium binding protein... 0.03 Orthogroups_2024-Update
Potri.010G107932 No alias Caleosin-related family protein 0.02 Orthogroups_2024-Update
Sobic.001G452200.1 No alias Caleosin-type peroxygenase 0.02 Orthogroups_2024-Update
Sopen01g001420 No alias Caleosin related protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007736 Caleosin-related 59 226
No external refs found!